Module	Section	Sample Name	Source
QualiMap	coverage_histogram	2TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/2TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	3TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/3TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	coverage_histogram	1TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/1TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/coverage_histogram.txt
QualiMap	genome_results	1TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | asm_pair-smds	/data/m/tsb1/map/1TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/genome_results.txt
QualiMap	genome_results	2TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | asm_pair-smds	/data/m/tsb1/map/2TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/genome_results.txt
QualiMap	genome_results	3TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | asm_pair-smds	/data/m/tsb1/map/3TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/genome_results.txt
QualiMap	insert_size_histogram	2TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/2TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	3TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/3TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	insert_size_histogram	1TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/1TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/insert_size_histogram.txt
QualiMap	mapped_gc_distribution	2TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/2TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	3TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/3TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
QualiMap	mapped_gc_distribution	1TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-smds_stats | raw_data_qualimapReport | asm_pair-smds_stats	/data/m/tsb1/map/1TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smds_stats/raw_data_qualimapReport/mapped_reads_gc-content_distribution.txt
Picard	DuplicationMetrics	3TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-s	/data/m/tsb1/map/3TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smd.metrics
Picard	DuplicationMetrics	2TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-s	/data/m/tsb1/map/2TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smd.metrics
Picard	DuplicationMetrics	1TSB_L7_R1_001_dedup.fastq.gz | bowtie2 | asm_pair-s	/data/m/tsb1/map/1TSB_L7_R1_001_dedup.fastq.gz/bowtie2/asm_pair-smd.metrics
